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Carmel Valley Invitational — Heredity

Heredity · Division B · Carmel Valley Invitational · 2026

82 questions · 175 points · 50 min· 11 questions from the original omitted

Original test source

Please wait for instructions before opening your test booklet. Record your answers on the provided answer sheet.

Section 1: MCQ

Question 1

2 pts

A population shows 36% recessive phenotype ( q² = 0.36 ). What is the dominant allele frequency?

Question 2

2 pts

After 20 perfect PCR cycles, approximately how many copies of a single DNA template exist?

Question 3

2 pts

A heterozygous plant produces gametes in the ratio A : a = 48% : 52%. Which process most likely caused this deviation?

Question 4

2 pts

A restriction enzyme recognizes a 4-bp sequence. On average, how often will it cut random DNA?

Question 5

2 pts

A pedigree shows unaffected mothers producing affected sons; affected males do not pass the trait to their sons. Most likely inheritance?

Question 6

2 pts

A codon for serine mutates into a stop codon. What type of mutation is this?

Question 8

2 pts

Two genes produce a 9:7 phenotypic ratio. What interaction is this?

Question 9

2 pts

A heterozygote (Dd) shows a faint 1000-bp band (D) and a bright 600-bp band (d). What explains the unequal intensities?

Question 10

2 pts

A tRNA has anticodon 3′-GAC-5′. Which codon does it bind?

Question 11

2 pts

Two genes are 15 map units apart. What percentage of offspring from a testcross is recombinant?

Question 12

2 pts

What occurs during the 95°C step of PCR?

Question 13

2 pts

A DNA sample contains 30% adenine. What percent is cytosine?

Question 14

2 pts

A cell with nondisjunction in Meiosis I produces gametes with which chromosome numbers? (if 2n = 6)

Question 15

2 pts

Which enzyme creates RNA primers during DNA replication?

Question 16

2 pts

Which molecule binds to the operator of the lac operon?

Question 17

2 pts

A 9:3:4 ratio indicates:

Question 18

2 pts

Crossing-over occurs mainly during:

Question 19

2 pts

DNA polymerase adds nucleotides to which end of a growing DNA strand?

Question 20

2 pts

Which structure is present on the lagging strand but not the leading strand?

Question 22

2 pts

Which step of transcription occurs first?

Question 23

2 pts

A mutation in the promoter of a gene most likely affects:

Question 24

2 pts

What is the role of helicase?

Question 25

2 pts

A dihybrid cross results in only parental phenotypes. Which is the best explanation?

Question 26

2 pts

Which molecule delivers amino acids to the ribosome during translation?

Question 27

2 pts

A DNA mutation that does not change the amino acid sequence is called:

Question 28

2 pts

In PCR, which factor most strongly determines specificity?

Question 29

2 pts

A gene with multiple phenotypic effects is described as:

Question 30

2 pts

Which of the following occur during the metaphase of mitosis?

Question 31

2 pts

In which stage of mitosis does the nuclear envelope reform (now at each end of the cell):

Question 32

2 pts

Human chromosomes and mitochondrial chromosomes differ most in which of the following?

Question 33

2 pts

Your half-brother Ayden is about to drown in a freezing river. According to Hamilton’s rule, at least what chance of success would you need to have in order to justify trying to rescue him? Assume both of you survive if you succeed, both of you die if you try but fail, and he dies while you survive if you do not try to rescue him.

Question 34

2 pts

Treatment of a linear DNA molecule with the palindromic endonuclease DpnII (5-GATC-3) produces 50 fragments. How many fragments would you expect to be produced when the same original linear molecule is treated with BamHI (5 - GGATCC-3)?

Question 35

2 pts

An autosomal dominant condition causes death in 1 out of every 50 offspring in the Australian mouse population. Assume the condition is lethal in 80% of affected individuals. What is the frequency of the disease allele in the population?

Challenge Studies

Question CS1

4 pts

A well-established geneticist, Dr. Kanone, is famous for experiments on the common plant Camellia japonica. In particular, Dr. Kanone has several mutant, true-breeding lines of C. japonica. Line A gives off a sweet odor, line B gives off a musty odor, and line C gives off no odor at all. When he crosses lines A and B, he obtains only sweet-odor plants. When he crosses lines B and C, he obtains only musty-odor plants. Moreover, when he self-crosses the offspring of lines A and B, he gets mostly sweet-odor plants, some musty-odor plants, and a few no-odor plants. Which of the following statements must be not true?

Question CS2

4 pts

Your professor Dr. Umbra is studying a population of Vulpes glacialis, a common mammal. She is interested in two phenotypes: black-haired V. glacialis and blue-haired V. glacialis. It is thought that the blue-hair phenotype is the recessive phenotype. Interestingly enough, however, in a sample of 5000 male V. glacialis and 5000 female V. glacialis, Dr. Orange finds that there are 1600 male blue-haired V. glacialis but only 512 female blue-haired V. glacialis. Which of the following is the best explanation of this phenomenon?

Question CS3

4 pts

Interference occurs when crossing over in one part of a chromosome influences crossing over in other regions of the same chromosome. Interference (I) can be calculated from the coefficient of coincidence (C) by the following equations. Note: DCO = number of double crossovers. Using the data from the reference map with the a, b and c genes in Rosophilo, what is the interference from this cross? Select ONE.

Reference Map: c — 1.64 cM — a — 6.39 cM — b

Question CS4

4 pts · select all that apply

A scientist was interested in the expression rate of the herpes DNA polymerase during a herpes infection. She collected samples 8 and 14 hours post-infection and generated cDNA. The samples from 8 hours postinfection were labeled with a green fluorescent dye and the samples from 14 hours post- infection were labeled with a red fluorescent dye. During microarray analysis, spots corresponding to the DNA polymerase sequence on the microchip were yellow. Which of the following TWO statements BEST interprets these results?

Question CS6

4 pts · select all that apply

After being treated with a drug, a cell line suddenly contains abnormally low levels of protein. However, transcriptomic profiling shows that mRNA levels are still high. By which of the following mechanisms could the drug be decreasing protein levels? SELECT ALL POSSIBLE ANSWERS.

Case Study 2

FigureFor questions CS2-1–CS2-4

Idol syndrome, an autosomal recessive disease which manifests at around age 10 is linked to a short tandem repeat locus with an observed recombination frequency of 8%. Two individuals (being II-1 and II-2), who each had a parent with Idol syndrome, have a newborn daughter (III-1) and are worried about her getting Idol syndrome. A quick genetic test consisting of PCR amplification of the linked short tandem repeat locus revealed the following results:

Question CS2-1

3 pts

Now based on this information, what is the probability that the newborn daughter (III-1) will develop Idol syndrome later in life?

Question CS2-2

2 pts

For the following problem, assume Hardy Weinberg equilibrium: Roughly 5% of human males are colorblind. This is caused by a recessive mutation carried on the X chromosome. If an XX female is not colorblind herself, what is the probability that she carries at least one copy of the mutant allele for colorblindness?

Question CS2-3

2 pts

Which of the following equations is an identity of the Hardy-Weinberg equilibrium theory that relies on random mating?

Question CS2-4

2 pts

In the biolistic gene-gun method, DNA is coated onto microscopic particles before being shot into cells. Which particles are most commonly used for this technique?

FRQ #1 - Diagrams

FigureFor questions FRQ1-1a, FRQ1-1b, FRQ1-2a, FRQ1-2b
Disease Name [1 point per row]Explanation of disease symptoms and how you identified it from the karyotype. [2 points per row]
1a.
1b.
2a.
2b.

Question FRQ1-1a

1 pt

Disease Name (row 1a)

Question FRQ1-1b

2 pts

Explanation of disease symptoms and how you identified it from the karyotype (row 1b)

Question FRQ1-2a

1 pt

Disease Name (row 2a)

Question FRQ1-2b

2 pts

Explanation of disease symptoms and how you identified it from the karyotype (row 2b)

FigureFor questions FRQ1-1–FRQ1-2

(Ignore the numbers on this pedigree)

Question FRQ1-1

1 pt

What type of inheritance does this pedigree show?

Question FRQ1-2

2 pts

What reasoning did you use to make this conclusion?

FRQ #2 - Mutations

Question FRQ2-1

2 pts

What is the complement strand to the following sequence: 5’-TACCCGTACGATATT-3’

Question FRQ2-2

2 pts

What is the resultant amino acid peptide:

Question FRQ2-3

3 pts

Say that a mutation in the original sequence resulted in 5’-TAC A CCGTACGATATT-3’, what kind of mutation is this and list multiple consequences?

Question FRQ2-4

3 pts

Now say that a mutation in the original sequence resulted in 5’-TACCCGTAC T ATATT-3’, what kind of mutation is this and list multiple consequences?

Question FRQ2-5a

2 pts

Explain the following mutations: Silent Mutation

Question FRQ2-5b

2 pts

Explain the following mutations: Missense Mutation

Question FRQ2-5c

2 pts

Explain the following mutations: Nonsense Mutation

Question FRQ2-5d

1 pt

Give an example of a disease caused by a Missense Mutation

FRQ #3 - DNA Replication

Question FRQ3-1

2 pts

Explain the functions of the following enzymes in DNA replication: Helicase

Question FRQ3-2

2 pts

Explain the functions of the following enzymes in DNA replication: Topoisomerase

Question FRQ3-3

2 pts

Explain the functions of the following enzymes in DNA replication: Primase

Question FRQ3-4

2 pts

Explain the functions of the following enzymes in DNA replication: DNA Polymerase (general functions)

Question FRQ3-5

2 pts

Explain the functions of the following enzymes in DNA replication:

The following enzymes are specifically for eukaryotes: DNA Polymerase α

Question FRQ3-6

2 pts

Explain the functions of the following enzymes in DNA replication:

The following enzymes are specifically for eukaryotes: DNA Polymerase δ

Question FRQ3-7

2 pts

Explain the functions of the following enzymes in DNA replication:

The following enzymes are specifically for eukaryotes: DNA Polymerase ε

Question FRQ3-8

2 pts

Explain the functions of the following enzymes in DNA replication:

The following enzymes are specifically for prokaryotes: DNA Polymerase III

Question FRQ3-9

2 pts

Explain the functions of the following enzymes in DNA replication:

The following enzymes are specifically for prokaryotes: DNA Polymerase I

Question FRQ3-10

2 pts

Explain the functions of the following enzymes in DNA replication:

The following enzymes are specifically for prokaryotes: DNA Ligase

FRQ #4 - Biotechnology

Question FRQ4-1

2 pts

What is the definition of the word transgenic?

Question FRQ4-2

2 pts

What are some vectors used in genetic engineering?

Question FRQ4-3

1 pt

What does CRISPR stand for?

PassageFor questions FRQ4-4–FRQ4-5

A researcher is trying to amplify a 900-bp gene using PCR. They use the following parameters:

  • Annealing temperature: 42 degrees Celsius
  • Primers: 20 bp each, GC content 60%
  • Mg²⁺ concentration: 5 mM (very high)
  • Extension: 30 seconds at 72 degrees Celsius

Instead of a single expected band, the gel shows many nonspecific bands ranging from 200-3000 bp.

Question FRQ4-4

2 pts

Identify two factors likely causing nonspecific amplification

Question FRQ4-5

2 pts

Suggest a fix for each issue

PassageFor questions FRQ4-6–FRQ4-7

You want to knock out a gene in mice using CRISPR/Cas9. The target sequence is: 5’-AGCTTGACGGATCCTGAGAC GGG-3’ The PAM is the last three bases (in bold).

Question FRQ4-6

2 pts

What is the responsibility of the PAM sequence in CRISPR?

Question FRQ4-7

2 pts

Write a valid 20-bp guide RNA that would direct Cas9 to this site

FRQ #5 - Peas

PassageFor questions FRQ5-2–FRQ5-5

Pea plants contain genes for both color (Y) and shape (R). The dominant color is yellow and the recessive color is green. Moreover, the dominant shape is round while the recessive shape is wrinkled. Pea plants that are homozygous dominant for both yellow and round traits are crossed with pea plants that are recessive for color and heterozygous for shape.

Question FRQ5-2

2 pts

Provide the Phenotypic ratio

Question FRQ5-3

2 pts

Provide the Genotypic ratio

Question FRQ5-4

2 pts

Who was the scientist who first conducted heredity related experiments on pea plants?

Question FRQ5-5

2 pts

Define epistasis

FRQ #6 - Diagnosis

PassageFor questions FRQ6-1–FRQ6-5

Patient: Ayden Huang Age: 22 years Sex: XY Referral Reason: Progressive neuromuscular disease with cardiopulmonary involvement

History of Present Illness Ayden is a 22 year old college student at Washington University in St. Louis. Recently he was referred to a neuromuscular clinic for evaluation of a long standing, progressive muscle weakness and increasing respiratory fatigue. Symptoms began in early childhood with delayed walking and difficulty running. Losing independent abulation during early adolescence and has been wheelchair dependent since age 11.

He reports worsening upper extremity weakness over the past several years and increasing dyspnea, especially when he is lying flat… in fear of never accomplishing his dreams of becoming an astrophysicist he seeks out your advice.

Question FRQ6-1

2 pts

Based on the patient’s age of onset, pattern of muscle weakness, and progression, what is the most likely diagnosis?

Question FRQ6-2

2 pts

Which gene most likely mutated in this patient? What type of inheretance pattern does it follow?

Question FRQ6-3

4 pts

Which disorder is the most important differential diagnosis, and how can it be distinguished molecularly from the onset diagnosis?

Question FRQ6-4

3 pts

Is it likely for Ayden to survive long enough to complete his lifelong goal of contributing to the Laser Interferometer Space Antenna (LISA) Gravitational Wave Observatory, assuming this goal would require an additional 20 years to complete? List at least 2 reasons for your claim.

Question FRQ6-5

2 pts

Which laboratory finding would be expected early in the disease course but may be less prominent at age 22?